Aug 25 20:28:20 2017 47611 7 9.1.3 jobSetupStatus: job additionalInfo reservation_id=4369877 + export machine=WCOSS_C + machine=WCOSS_C + ulimit -a core file size (blocks, -c) unlimited data seg size (kbytes, -d) unlimited scheduling priority (-e) 0 file size (blocks, -f) unlimited pending signals (-i) 515307 max locked memory (kbytes, -l) 64 max memory size (kbytes, -m) 2457600 open files (-n) 819200 pipe size (512 bytes, -p) 8 POSIX message queues (bytes, -q) 819200 real-time priority (-r) 0 stack size (kbytes, -s) unlimited cpu time (seconds, -t) unlimited max user processes (-u) 515307 virtual memory (kbytes, -v) 52778400 file locks (-x) unlimited + ulimit -s unlimited + export USER=George.Gayno + USER=George.Gayno + export res=96 + res=96 + export gtype=uniform + gtype=uniform + export OMP_NUM_THREADS=6 + OMP_NUM_THREADS=6 + export OMP_STACKSIZE=2048m + OMP_STACKSIZE=2048m + '[' WCOSS_C = WCOSS_C ']' + set +x Currently Loaded Modulefiles: 1) modules/3.2.6.7 2) nodestat/2.2-1.0502.58998.2.7.ari 3) sdb/1.0-1.0502.58450.3.27.ari 4) alps/5.2.3-2.0502.9295.14.14.ari 5) ugni/6.0-1.0502.10245.9.9.ari 6) xpmem/0.1-2.0502.57015.1.15.ari 7) hss-llm/7.2.0 8) flexlm/11.6.1-1.0502.8775.10.1.ari 9) job/1.5.5-0.1_2.0502.57057.1.38.ari 10) sysutils/1.0-1.0502.57470.2.1.ari 11) codbc/1.1-1.0502.59028.1.1.ari 12) sysadm/1.0-1.0502.57017.1.26.ari 13) projdb/1.0.0-1.0502.57075.1.26.ari 14) account/1.0.0-2.0502.57005.1.37.ari 15) csa/3.0.0-1_2.0502.57046.1.58.ari 16) krca/1.0.0-2.0502.57202.2.45.ari 17) fcheck/2.2-1.0502.57071.1.1.ari 18) shared-root/1.0-1.0502.57059.1.36.ari 19) nodehealth/5.1-1.0502.59960.9.3.ari 20) configuration/1.0-1.0502.57072.1.12.ari 21) hosts/1.0-1.0502.57019.1.58.ari 22) sh/1.0-1.0502.57060.1.1.ari 23) switch/1.0-1.0502.57058.1.58.ari 24) hsn/1.0-1.0502.57030.1.11.ari 25) pdsh/2.26-1.0502.57061.1.1.ari 26) boot/1.0-1.0502.57080.1.58.ari 27) init-service/1.0-1.0502.59393.2.9.ari 28) lbcd/2.1-1.0502.57012.1.10.ari 29) rsipd/0.9.7.2-1.0502.59961.3.3.ari 30) lustre-utils/2.3-1.0502.17981.2.41.ari 31) nic-compat/1.0-1.0502.57043.1.15.ari 32) cnrte/1.0-1.0502.57053.1.1.ari 33) msgsupport/1.0-1.0502.57041.1.10.ari 34) dumpd/1.4.1-1.0502.59006.1.12.ari 35) ibverbs/1.1.2-1.0502.10363.2.1.ari 36) isvaccel/1.0-1.0502.58456.2.25.ari 37) batchlimit/1.0-1.0502.57051.1.32.ari 38) /opt/cray/modulefiles/cudatoolkit/5.5.51-1.0502.9594.2.1 39) /opt/cray/modulefiles/cudatoolkit/6.5.14-1.0502.9836.9.1 40) pbs_hooks/1.0.0-1.0502.57045.1.1.ari 41) wlm_trans/1.0-1.0502.57172.2.59.ari 42) wlm_detect/1.0-1.0502.57063.1.1.ari 43) nodehealth-xeon-phi/1.0-1.0502.57120.1.27.ari 44) alpscomm/1.0-1.0502.9178.3.32.ari 45) socketauth/1.0-1.0502.9089.1.1.ari 46) swrap/1.0-1.0502.9091.1.1.ari 47) comm_msg/1.0-1.0502.9144.2.1.ari 48) daemontools/1.0-1.0502.9085.1.1.ari 49) ncmd/1.0-1.0502.9223.2.6.ari 50) aeld/1.0-1.0502.9221.2.19.ari 51) apptermd/1.0-1.0502.9228.2.14.ari 52) logcb/1.0-1.0502.57008.1.1.ari 53) configparse/1.0.0-1.0502.57069.1.55.ari 54) /opt/cray/modulefiles/ccm/2.2.0-1.0502.59807.5.4 55) libscif/3.4.1-1.0502.58492.1.7.ari 56) mpss-coi/3.4.1-1.0502.58490.1.7.ari 57) intel-KNC-host-mpss/3.4.1-1.0502.58493.1.7.ari 58) micmcad/1.0-1.0502.57023.1.24.ari/module 59) gni-gpcdr-utils/1.0-1.0502.10364.11.1.ari 60) gsocket/1.1-1.0502.10272.11.7.ari 61) keystone-cle-config/1.0-1.0502.114.3.1.ari 62) swap/1.0-1.0502.57121.1.1.ari 63) iscsitarget/1.4.20-1.0502.1911.1.15.ari 64) crash_utility/1.0-1.0502.59023.8.1.ari 65) dvs/2.5_0.9.0-1.0502.2382.2.124.ari 66) rur/1.0-1.0502.67249.16.1.ari 67) admin-modules/1.0.2-1.0502.57047.1.1.ari 68) Base-opts/1.0.2-1.0502.57047.1.1.ari 69) craype-network-aries 70) craype-haswell 71) ncep/1.0 72) xt-lsfhpc/9.1.3 73) GrADS/2.0.2 74) subversion/1.7.16 75) hpss/4.1.0.3 76) nco-gnu-sandybridge/4.4.4 77) craype/2.3.0 78) intel/15.0.3.187 79) cray-libsci/13.0.3 80) pmi/5.0.6-1.0000.10439.140.2.ari 81) atp/1.8.1 82) PrgEnv-intel/5.2.56 83) cfp-intel-sandybridge/1.1.0 + export NODES=1 + NODES=1 + export 'APRUN=aprun -n 1 -N 1 -j 1 -d 1 -cc depth' + APRUN='aprun -n 1 -N 1 -j 1 -d 1 -cc depth' + export KMP_AFFINITY=disabled + KMP_AFFINITY=disabled + export home_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/.. + home_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/.. + export topo=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + topo=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export exec_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec + exec_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec + export out_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96 + out_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96 + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + '[' uniform = uniform ']' + echo 'creating uniform ICs' creating uniform ICs + '[' 96 -eq 48 ']' + '[' 96 -eq 96 ']' + export cd4=0.12 + cd4=0.12 + export max_slope=0.12 + max_slope=0.12 + export n_del2_weak=8 + n_del2_weak=8 + export peak_fac=1.1 + peak_fac=1.1 + '[' uniform = uniform ']' + export ntiles=6 + ntiles=6 + export name=C96 + name=C96 + export grid_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + grid_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export orog_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + orog_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export filter_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo + filter_dir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo + rm -rf /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96 + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo + echo + echo '............ execute fv3gfs_make_grid.sh .................' ............ execute fv3gfs_make_grid.sh ................. + /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_grid.sh 96 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + nargv=3 + [ 3 -ne 3 -a 3 -ne 6 -a 3 -ne 12 ] + res=96 + export res + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export outdir + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid ] + expr 96 '*' 2 + nx=192 + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + [ 3 -eq 3 ] + ntiles=6 + export ntiles + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/make_hgrid + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/make_hgrid ] + aprun -n 1 -N 1 -j 1 -d 1 -cc depth /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/make_hgrid --grid_type gnomonic_ed --nlon 192 --grid_name C96_grid Application 64314715 resources: utime ~0s, stime ~0s, Rss ~17080, inblocks ~7645, outblocks ~45178 + [ 0 -ne 0 ] + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/make_solo_mosaic + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/make_solo_mosaic ] + [ 6 -eq 6 ] + aprun -n 1 -N 1 -j 1 -d 1 -cc depth /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/make_solo_mosaic --num_tiles 6 --dir /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid --mosaic C96_mosaic --tile_file C96_grid.tile1.nc,C96_grid.tile2.nc,C96_grid.tile3.nc,C96_grid.tile4.nc,C96_grid.tile5.nc,C96_grid.tile6.nc NOTE from make_solo_mosaic: there are 12 contacts (align-contact) congradulation: You have successfully run make_solo_mosaic Application 64314722 resources: utime ~0s, stime ~0s, Rss ~11512, inblocks ~38907, outblocks ~19753 + exit ++ date + echo 'Begin uniform orography generation at Fri Aug 25 20:28:30 UTC 2017' Begin uniform orography generation at Fri Aug 25 20:28:30 UTC 2017 + '[' WCOSS_C = WCOSS_C ']' + export APRUN=time + APRUN=time + echo '/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 3 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform ' + echo '/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 6 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform ' + echo '/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 1 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform ' + echo '/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 2 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform ' + echo '/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 4 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform ' + echo '/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 5 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform ' + aprun -j 1 -n 4 -N 4 -d 6 -cc depth cfp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/orog.file1 cfp: distributing 6 commands among 4 server task(s)/thread(s). cfp: server task 1 executing "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 3 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " at 2017/08/25 20:28:35.263768. cfp: server task 3 executing "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 1 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " at 2017/08/25 20:28:35.263777. cfp: server task 2 executing "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 6 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " at 2017/08/25 20:28:35.263777. cfp: server task 0 executing "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 2 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " at 2017/08/25 20:28:35.263757. + nargv=7 + inorogexist=0 + export inorogexist + [ 7 -eq 6 ] + [ 7 -eq 7 ] + res=96 + export res + lonb=96 + export lonb + latb=96 + export latb + tile=3 + export tile + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + ntiles=6 + export ntiles + is_latlon=0 + export is_latlon + orogfile=none + export orogfile + hist_dir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export hist_dir + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export TMPDIR + workdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile3 + export workdir + indir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export indir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ] + nargv=7 + inorogexist=0 + export inorogexist + [ 7 -eq 6 ] + [ 7 -eq 7 ] + res=96 + export res + lonb=96 + export lonb + latb=96 + export latb + tile=1 + export tile + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + ntiles=6 + export ntiles + is_latlon=0 + export is_latlon + orogfile=none + export orogfile + hist_dir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export hist_dir + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export TMPDIR + workdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile1 + export workdir + indir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export indir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile3 ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile1 ] + nargv=7 + inorogexist=0 + export inorogexist + [ 7 -eq 6 ] + [ 7 -eq 7 ] + res=96 + export res + lonb=96 + export lonb + latb=96 + export latb + tile=2 + export tile + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + ntiles=6 + export ntiles + is_latlon=0 + export is_latlon + orogfile=none + export orogfile + hist_dir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export hist_dir + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export TMPDIR + workdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile2 + export workdir + indir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export indir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile2 ] + nargv=7 + inorogexist=0 + export inorogexist + [ 7 -eq 6 ] + [ 7 -eq 7 ] + res=96 + export res + lonb=96 + export lonb + latb=96 + export latb + tile=6 + export tile + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + ntiles=6 + export ntiles + is_latlon=0 + export is_latlon + orogfile=none + export orogfile + hist_dir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export hist_dir + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export TMPDIR + workdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile6 + export workdir + indir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export indir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile6 ] + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile6 + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile1 + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile3 + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile2 + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog ] + jcap=0 + export jcap + NF1=0 + export NF1 + NF2=0 + export NF2 + mtnres=1 + export mtnres + efac=0 + export efac + blat=0 + export blat + NR=0 + export NR + [ 0 -eq 1 ] + OUTGRID=C96_grid.tile6.nc + export OUTGRID + echo 'OUTGRID = C96_grid.tile6.nc' + echo 'workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile6' OUTGRID = C96_grid.tile6.nc workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile6 outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + echo 'outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog' + echo 'indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog' + jcap=0 + export jcap + NF1=0 + export NF1 + NF2=0 + export NF2 + mtnres=1 + export mtnres + efac=0 + export efac + blat=0 + export blat + NR=0 + export NR + [ 0 -eq 1 ] + OUTGRID=C96_grid.tile1.nc + export OUTGRID + echo 'OUTGRID = C96_grid.tile1.nc' + echo 'workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile1' + echo 'outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog' + echo 'indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog' + jcap=0 + export jcap + NF1=0 + export NF1 + NF2=0 + export NF2 + mtnres=1 + export mtnres + efac=0 + export efac + blat=0 + export blat + NR=0 + export NR + [ 0 -eq 1 ] + OUTGRID=C96_grid.tile3.nc + export OUTGRID + echo 'OUTGRID = C96_grid.tile3.nc' + echo 'workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile3' + echo 'outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog' + echo 'indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog' OUTGRID = C96_grid.tile1.nc workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile1 outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog OUTGRID = C96_grid.tile3.nc workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile3 outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog ] + jcap=0 + export jcap + NF1=0 + export NF1 + NF2=0 + export NF2 + mtnres=1 + export mtnres + efac=0 + export efac + blat=0 + export blat + NR=0 + export NR + [ 0 -eq 1 ] + OUTGRID=C96_grid.tile2.nc + export OUTGRID + echo 'OUTGRID = C96_grid.tile2.nc' + echo 'workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile2' OUTGRID = C96_grid.tile2.nc workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile2 outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + echo 'outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog' + echo 'indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog' + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile3 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/thirty.second.antarctic.new.bin fort.15 + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile2 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/thirty.second.antarctic.new.bin fort.15 + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile6 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/thirty.second.antarctic.new.bin fort.15 + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile1 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/thirty.second.antarctic.new.bin fort.15 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/landcover30.fixed . + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/landcover30.fixed . + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/landcover30.fixed . + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/landcover30.fixed . + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/gmted2010.30sec.int fort.235 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/gmted2010.30sec.int fort.235 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/gmted2010.30sec.int fort.235 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/gmted2010.30sec.int fort.235 + [ 0 -eq 1 ] + [ 0 -eq 0 ] + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile1.nc . + [ 0 -eq 1 ] + [ 0 -eq 0 ] + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile2.nc . + [ 0 -eq 1 ] + [ 0 -eq 0 ] + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile3.nc . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x . + echo 1 96 96 0 0 0 0 0 0 + 1> INPS + echo C96_grid.tile1.nc + 1>> INPS + echo 1 96 96 0 0 0 0 0 0 + 1> INPS + echo 1 96 96 0 0 0 0 0 0 + 1> INPS + echo C96_grid.tile3.nc + 1>> INPS + echo C96_grid.tile2.nc + 1>> INPS + echo none + 1>> INPS + echo none + 1>> INPS + echo none + 1>> INPS + cat INPS 1 96 96 0 0 0 0 0 0 C96_grid.tile1.nc none + time /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + cat INPS + cat INPS 1 96 96 0 0 0 0 0 0 C96_grid.tile3.nc none 1 96 96 0 0 0 0 0 0 C96_grid.tile2.nc none + time /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + 0< INPS + time /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + 0< INPS + 0< INPS INPUTOROG=none IM,JM= 96 96 1 96 96 0 0 0 INPUTOROG=none 0 0 0 Starting terr12 mtnlm7_slm30.f IMN,JMN: 43200 21600 IM,JM= 96 96 1 96 96 0 0 0 0 0 0 Starting terr12 mtnlm7_slm30.f IMN,JMN: 43200 21600 INPUTOROG=none IM,JM= 96 96 1 96 96 0 0 0 0 0 0 Starting terr12 mtnlm7_slm30.f IMN,JMN: 43200 21600 outgrid=C96_grid.tile1.nc outgrid=C96_grid.tile3.nc outgrid=C96_grid.tile2.nc nx = 192 nx = 192 In TERSUB, ITOPO= 1 Ocean Model LSM Present and Overrides OCEAN POINTS in LSM: mskocn= 1 Ocean LSM Reversed: NOTOCN= 1 Attempt to open/read UMD 30" slmsk MSKSRC= 1 In TERSUB, ITOPO= 1 Ocean Model LSM Present and Overrides OCEAN POINTS in LSM: mskocn= 1 Ocean LSM Reversed: NOTOCN= 1 Attempt to open/read UMD 30" slmsk MSKSRC= 1 nx = 192 In TERSUB, ITOPO= 1 Ocean Model LSM Present and Overrides OCEAN POINTS in LSM: mskocn= 1 Ocean LSM Reversed: NOTOCN= 1 Attempt to open/read UMD 30" slmsk MSKSRC= 1 + [ 0 -eq 1 ] + [ 0 -eq 0 ] + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile6.nc . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x . + echo 1 96 96 0 0 0 0 0 0 + 1> INPS + echo C96_grid.tile6.nc + 1>> INPS + echo none + 1>> INPS + cat INPS 1 96 96 0 0 0 0 0 0 C96_grid.tile6.nc none + time /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + 0< INPS INPUTOROG=none IM,JM= 96 96 1 96 96 0 0 0 0 0 0 Starting terr12 mtnlm7_slm30.f IMN,JMN: 43200 21600 outgrid=C96_grid.tile6.nc nx = 192 In TERSUB, ITOPO= 1 Ocean Model LSM Present and Overrides OCEAN POINTS in LSM: mskocn= 1 Ocean LSM Reversed: NOTOCN= 1 Attempt to open/read UMD 30" slmsk MSKSRC= 1 UMD lake mask opened OK -- ios,MSKSRC: 0 1 UMD lake, UMD(50,50)= 0 1 About to call read_g, ITOPO= 1 UMD lake mask opened OK -- ios,MSKSRC: 0 1 UMD lake, UMD(50,50)= 0 1 About to call read_g, ITOPO= 1 UMD lake mask opened OK -- ios,MSKSRC: 0 1 UMD lake, UMD(50,50)= 0 1 About to call read_g, ITOPO= 1 UMD lake mask opened OK -- ios,MSKSRC: 0 1 UMD lake, UMD(50,50)= 0 1 About to call read_g, ITOPO= 1 global0 max= 8625 min= -430 sum= 354026391267 i_count_notset= 0 global0 mean= 379 std.dev= 858 ko9s= 933120000 0 933120000 global0 max= 8625 min= -430 sum= 354026391267 i_count_notset= 0 global0 mean= 379 std.dev= 858 ko9s= 933120000 0 933120000 global0 max= 8625 min= -430 sum= 354026391267 i_count_notset= 0 global0 mean= 379 std.dev= 858 ko9s= 933120000 0 933120000 global0 max= 8625 min= -430 sum= 354026391267 i_count_notset= 0 global0 mean= 379 std.dev= 858 ko9s= 933120000 0 933120000 After read_g, glob(500,500)= 2657 IM, JM, NM, NR, NF0, NF1, EFAC, BLAT 96 96 0 0 0 0 0 0 imn,jmn,glob(imn,jmn)= 43200 21600 0 UBOUND ZAVG= 43200 21600 UBOUND glob= 43200 21600 UBOUND ZSLM= 43200 21600 UBOUND GICE= 43201 3601 UBOUND OCLSM= 96 96 After read_g, glob(500,500)= 2657 IM, JM, NM, NR, NF0, NF1, EFAC, BLAT 96 96 0 0 0 0 0 0 imn,jmn,glob(imn,jmn)= 43200 21600 0 UBOUND ZAVG= 43200 21600 UBOUND glob= 43200 21600 UBOUND ZSLM= 43200 21600 UBOUND GICE= 43201 3601 UBOUND OCLSM= 96 96 After read_g, glob(500,500)= 2657 IM, JM, NM, NR, NF0, NF1, EFAC, BLAT 96 96 0 0 0 0 0 0 imn,jmn,glob(imn,jmn)= 43200 21600 0 UBOUND ZAVG= 43200 21600 UBOUND glob= 43200 21600 UBOUND ZSLM= 43200 21600 UBOUND GICE= 43201 3601 UBOUND OCLSM= 96 96 After read_g, glob(500,500)= 2657 IM, JM, NM, NR, NF0, NF1, EFAC, BLAT 96 96 0 0 0 0 0 0 imn,jmn,glob(imn,jmn)= 43200 21600 0 UBOUND ZAVG= 43200 21600 UBOUND glob= 43200 21600 UBOUND ZSLM= 43200 21600 UBOUND GICE= 43201 3601 UBOUND OCLSM= 96 96 29 0 COMPUTE TERRAIN ON A FULL GAUSSIAN GRID SPECTR= F REVLAT= F ** with GICE-07 ** XLAT= -90.000 -88.105 -86.211 -84.316 -82.421 -80.526 -78.632 -76.737 -74.842 -72.947 -71.053 -69.158 -67.263 -65.368 -63.474 -61.579 -59.684 -57.789 -55.895 -54.000 -52.105 -50.211 -48.316 -46.421 -44.526 -42.632 -40.737 -38.842 -36.947 -35.053 -33.158 -31.263 -29.368 -27.474 -25.579 -23.684 -21.789 -19.895 -18.000 -16.105 -14.211 -12.316 -10.421 -8.526 -6.632 -4.737 -2.842 -0.947 0.947 2.842 4.737 6.632 8.526 10.421 12.316 14.211 16.105 18.000 19.895 21.789 23.684 25.579 27.474 29.368 31.263 33.158 35.053 36.947 38.842 40.737 42.632 44.526 46.421 48.316 50.211 52.105 54.000 55.895 57.789 59.684 61.579 63.474 65.368 67.263 69.158 71.053 72.947 74.842 76.737 78.632 80.526 82.421 84.316 86.211 88.105 90.000 Before GICE ZAVG(1,2)= 2801 1 Before GICE ZAVG(1,12)= 2804 1 Before GICE ZAVG(1,52)= 2789 1 Before GICE ZAVG(1,112)= 0 1 29 0 COMPUTE TERRAIN ON A FULL GAUSSIAN GRID SPECTR= F REVLAT= F ** with GICE-07 ** XLAT= -90.000 -88.105 -86.211 -84.316 -82.421 -80.526 -78.632 -76.737 -74.842 -72.947 -71.053 -69.158 -67.263 -65.368 -63.474 -61.579 -59.684 -57.789 -55.895 -54.000 -52.105 -50.211 -48.316 -46.421 -44.526 -42.632 -40.737 -38.842 -36.947 -35.053 -33.158 -31.263 -29.368 -27.474 -25.579 -23.684 -21.789 -19.895 -18.000 -16.105 -14.211 -12.316 -10.421 -8.526 -6.632 -4.737 -2.842 -0.947 0.947 2.842 4.737 6.632 8.526 10.421 12.316 14.211 16.105 18.000 19.895 21.789 23.684 25.579 27.474 29.368 31.263 33.158 35.053 36.947 38.842 40.737 42.632 44.526 46.421 48.316 50.211 52.105 54.000 55.895 57.789 59.684 61.579 63.474 65.368 67.263 69.158 71.053 72.947 74.842 76.737 78.632 80.526 82.421 84.316 86.211 88.105 90.000 Before GICE ZAVG(1,2)= 2801 1 Before GICE ZAVG(1,12)= 2804 1 Before GICE ZAVG(1,52)= 2789 1 Before GICE ZAVG(1,112)= 0 1 29 0 COMPUTE TERRAIN ON A FULL GAUSSIAN GRID SPECTR= F REVLAT= F ** with GICE-07 ** XLAT= -90.000 -88.105 -86.211 -84.316 -82.421 -80.526 -78.632 -76.737 -74.842 -72.947 -71.053 -69.158 -67.263 -65.368 -63.474 -61.579 -59.684 -57.789 -55.895 -54.000 -52.105 -50.211 -48.316 -46.421 -44.526 -42.632 -40.737 -38.842 -36.947 -35.053 -33.158 -31.263 -29.368 -27.474 -25.579 -23.684 -21.789 -19.895 -18.000 -16.105 -14.211 -12.316 -10.421 -8.526 -6.632 -4.737 -2.842 -0.947 0.947 2.842 4.737 6.632 8.526 10.421 12.316 14.211 16.105 18.000 19.895 21.789 23.684 25.579 27.474 29.368 31.263 33.158 35.053 36.947 38.842 40.737 42.632 44.526 46.421 48.316 50.211 52.105 54.000 55.895 57.789 59.684 61.579 63.474 65.368 67.263 69.158 71.053 72.947 74.842 76.737 78.632 80.526 82.421 84.316 86.211 88.105 90.000 Before GICE ZAVG(1,2)= 2801 1 Before GICE ZAVG(1,12)= 2804 1 Before GICE ZAVG(1,52)= 2789 1 Before GICE ZAVG(1,112)= 0 1 29 0 COMPUTE TERRAIN ON A FULL GAUSSIAN GRID SPECTR= F REVLAT= F ** with GICE-07 ** XLAT= -90.000 -88.105 -86.211 -84.316 -82.421 -80.526 -78.632 -76.737 -74.842 -72.947 -71.053 -69.158 -67.263 -65.368 -63.474 -61.579 -59.684 -57.789 -55.895 -54.000 -52.105 -50.211 -48.316 -46.421 -44.526 -42.632 -40.737 -38.842 -36.947 -35.053 -33.158 -31.263 -29.368 -27.474 -25.579 -23.684 -21.789 -19.895 -18.000 -16.105 -14.211 -12.316 -10.421 -8.526 -6.632 -4.737 -2.842 -0.947 0.947 2.842 4.737 6.632 8.526 10.421 12.316 14.211 16.105 18.000 19.895 21.789 23.684 25.579 27.474 29.368 31.263 33.158 35.053 36.947 38.842 40.737 42.632 44.526 46.421 48.316 50.211 52.105 54.000 55.895 57.789 59.684 61.579 63.474 65.368 67.263 69.158 71.053 72.947 74.842 76.737 78.632 80.526 82.421 84.316 86.211 88.105 90.000 Before GICE ZAVG(1,2)= 2801 1 Before GICE ZAVG(1,12)= 2804 1 Before GICE ZAVG(1,52)= 2789 1 Before GICE ZAVG(1,112)= 0 1 GICE 30" Antarctica RAMP orog 43200x3616 read OK Processing! Processing! Processing! GICE 30" Antarctica RAMP orog 43200x3616 read OK Processing! Processing! Processing! Ocean lsm file Opened OK: mskocn,istat= 1 0 Rd fail: Ocean lsm - continue, mskocn,ios= 0 -1 outgrid=C96_grid.tile2.nc Read the grid from file C96_grid.tile2.nc minlat= -45.0000000000000 maxlat= 45.0000000000000 north pole supergrid index is 0 0 south pole supergrid index is 0 0 Timer 1 time= 14.7550000000047 _____ SUBROUTINE MAKEMT2 GICE 30" Antarctica RAMP orog 43200x3616 read OK Processing! Processing! Processing! Ocean lsm file Opened OK: mskocn,istat= 1 0 Rd fail: Ocean lsm - continue, mskocn,ios= 0 -1 outgrid=C96_grid.tile1.nc Read the grid from file C96_grid.tile1.nc minlat= -45.0000000000000 maxlat= 45.0000000000000 north pole supergrid index is 0 0 south pole supergrid index is 0 0 Timer 1 time= 14.6630000000005 _____ SUBROUTINE MAKEMT2 GICE 30" Antarctica RAMP orog 43200x3616 read OK Processing! Processing! Processing! Ocean lsm file Opened OK: mskocn,istat= 1 0 Rd fail: Ocean lsm - continue, mskocn,ios= 0 -1 outgrid=C96_grid.tile3.nc Read the grid from file C96_grid.tile3.nc minlat= 35.2643896827547 maxlat= 90.0000000000000 north pole supergrid index is 97 97 south pole supergrid index is 0 0 north pole at i,j= 48 48 north pole at i,j= 49 48 north pole at i,j= 48 49 north pole at i,j= 49 49 Timer 1 time= 14.9700000000012 _____ SUBROUTINE MAKEMT2 Ocean lsm file Opened OK: mskocn,istat= 1 0 Rd fail: Ocean lsm - continue, mskocn,ios= 0 -1 outgrid=C96_grid.tile6.nc Read the grid from file C96_grid.tile6.nc minlat= -90.0000000000000 maxlat= -35.2643896827546 north pole supergrid index is 0 0 south pole supergrid index is 97 97 south pole at i,j= 48 48 south pole at i,j= 49 48 south pole at i,j= 48 49 south pole at i,j= 49 49 Timer 1 time= 13.9100000000035 _____ SUBROUTINE MAKEMT2 ! MAKEMT ORO SLM VAR VAR4 DONE MAKEMT2 time= 9.43500000001222 rmin= -0.5863E+02 rmax= 0.2394E+04 ORO rmin= 0.0000E+00 rmax= 0.1000E+01 SLM rmin= 0.0000E+00 rmax= 0.8033E+03 VAR rmin= 0.0000E+00 rmax= 0.1000E+02 VAR4 MAKEPC2: DELTAY= 926.653477525523 ! MAKEMT ORO SLM VAR VAR4 DONE MAKEMT2 time= 14.0289999999950 rmin= -0.2797E+02 rmax= 0.5429E+04 ORO rmin= 0.0000E+00 rmax= 0.1000E+01 SLM rmin= 0.0000E+00 rmax= 0.1794E+04 VAR rmin= 0.0000E+00 rmax= 0.1000E+02 VAR4 MAKEPC2: DELTAY= 926.653477525523 ! MAKE Principal Coord DONE MAKEPC2 time= 9.32999999998719 rmin= -0.8980E+02 rmax= 0.8987E+02 THETA rmin= 0.0000E+00 rmax= 0.9984E+00 GAMMA rmin= 0.0000E+00 rmax= 0.1871E+00 SIGMA rmin= -0.5863E+02 rmax= 0.2394E+04 ORO inputorog=none calling MAKEOA2 to compute OA, OL IM= 96 JM= 96 IMN= 43200 JMN= 21600 ! MAKE Principal Coord DONE MAKEPC2 time= 13.7400000000052 rmin= -0.8993E+02 rmax= 0.8988E+02 THETA rmin= 0.0000E+00 rmax= 0.9974E+00 GAMMA rmin= 0.0000E+00 rmax= 0.3298E+00 SIGMA rmin= -0.2797E+02 rmax= 0.5429E+04 ORO inputorog=none calling MAKEOA2 to compute OA, OL IM= 96 JM= 96 IMN= 43200 JMN= 21600 ! MAKEOA2 EXIT MAKEOA2 time= 10.5250000000087 rmin= -0.1000E+01 rmax= 0.1000E+01 OA rmin= 0.0000E+00 rmax= 0.1000E+01 OL rmin= 0.0000E+00 rmax= 0.4685E+04 ELVMAX rmin= -0.5863E+02 rmax= 0.2394E+04 ORO MAXC3: 33 3 0 0 0 0 ===> Replacing ELVMAX with ELVMAX-ORO <=== ===> if ELVMAX<=ORO replace with proxy <=== ===> the sum of mean orog (ORO) and std dev <=== after MAXC 3-6 km: 3 0 0 0 rmin= 0.0000E+00 rmax= 0.3534E+04 ELVMAX Testing at point (itest,jtest)= 67 53 SLM(itest,jtest)= 1.00000000000000 67 53 ORO(itest,jtest)= 344.684284979424 67 53 SLM(itest,jtest)= 1.00000000000000 67 53 ORO(itest,jtest)= 344.684284979424 67 53 SEA 280. 4. MODIFIED TO LAND 313. 13. AT 72 63 LAND 773. 548. MODIFIED TO SEA 0. 74. AT 67 95 LAND 447. 342. MODIFIED TO SEA 1. 130. AT 94 95 after isolated points removed rmin= -0.5863E+02 rmax= 0.2394E+04 ORO ORO(itest,jtest)= 344.684284979424 VAR(itest,jtest)= 453.336722483660 VAR4(itest,jtest)= 10.0000000000000 OA(itest,jtest,1)= 0.407889179829377 OA(itest,jtest,2)= -0.393523809523810 OA(itest,jtest,3)= 8.775489499847822E-002 OA(itest,jtest,4)= 0.347521150221365 OL(itest,jtest,1)= 1.099173846753891E-003 OL(itest,jtest,2)= 1.200480192076831E-003 OL(itest,jtest,3)= 1.093149124056402E-002 OL(itest,jtest,4)= 4.272743457361581E-002 Testing at point (itest,jtest)= 67 53 THETA(itest,jtest)= -35.7848132299707 GAMMA(itest,jtest)= 0.712474731076390 SIGMA(itest,jtest)= 7.679653280177816E-002 ELVMAX(itest,jtest)= 3534.31571502058 EFAC= 0 rmin= 0.0000E+00 rmax= 0.3534E+04 ELVMAX NF1, NF0, FILTER= 0 0 F rmin= 0.0000E+00 rmax= 0.3534E+04 ELVMAX ELVMAX( 67 53 )= 3534.31571502058 after spectral filter is applied rmin= -0.5863E+02 rmax= 0.2394E+04 ORO rmin= -0.5863E+02 rmax= 0.2394E+04 ORF after nearest neighbor interpolation applied rmin= -0.5863E+02 rmax= 0.2394E+04 ORO rmin= -0.5863E+02 rmax= 0.2394E+04 ORF rmin= 0.0000E+00 rmax= 0.3534E+04 ELVMAX ORO,ORF(itest,jtest),itest,jtest: 344.684284979424 344.684284979424 67 53 ELVMAX( 67 53 )= 3534.31571502058 ORO,ELVMAX(i= 1 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 2 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 3 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 4 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 5 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 6 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 7 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 8 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 9 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 10 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 11 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 12 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 13 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 14 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 15 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 16 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 17 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 18 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 19 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 20 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 21 j= 96)= 0.00000E+00 0.00000E+00 0.0 Timer 5 time= 2.999999996973202E-003 Binary output time= 2.999999996973202E-003 netcdf dims are: 96 96 WRITE_NETCDF time= 5.599999999685679E-002 wrote netcdf file out.oro.tile?.nc ===== Deallocate Arrays and ENDING MTN VAR OROG program Total runtime time= 44.4270000000106 179.55user 4.18system 0:44.64elapsed 411%CPU (0avgtext+0avgdata 10643988maxresident)k 6692875inputs+1496outputs (12major+2663449minor)pagefaults 0swaps + [ 0 -ne 0 ] + [ 0 -eq 1 ] + outfile=oro.C96.tile1.nc + export outfile + mv ./out.oro.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile1.nc + echo 'file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile1.nc is created' + echo 'Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ' file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile1.nc is created Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + exit 0 cfp: server task 3 for "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 1 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " exited with status 0 at 2017/08/25 20:29:55.509669. cfp: server task 3 executing "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 4 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " at 2017/08/25 20:29:55.509799. + nargv=7 + inorogexist=0 + export inorogexist + [ 7 -eq 6 ] + [ 7 -eq 7 ] + res=96 + export res + lonb=96 + export lonb + latb=96 + export latb + tile=4 + export tile + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + ntiles=6 + export ntiles + is_latlon=0 + export is_latlon + orogfile=none + export orogfile + hist_dir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export hist_dir + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export TMPDIR + workdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile4 + export workdir + indir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export indir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile4 ] + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile4 + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog ] + jcap=0 + export jcap + NF1=0 + export NF1 + NF2=0 + export NF2 + mtnres=1 + export mtnres + efac=0 + export efac + blat=0 + export blat + NR=0 + export NR + [ 0 -eq 1 ] + OUTGRID=C96_grid.tile4.nc + export OUTGRID + echo 'OUTGRID = C96_grid.tile4.nc' + echo 'workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile4' + echo 'outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog' + echo 'indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog' OUTGRID = C96_grid.tile4.nc workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile4 outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile4 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/thirty.second.antarctic.new.bin fort.15 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/landcover30.fixed . + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/gmted2010.30sec.int fort.235 ! MAKEOA2 EXIT MAKEOA2 time= 15.9029999999912 rmin= -0.1000E+01 rmax= 0.1000E+01 OA rmin= 0.0000E+00 rmax= 0.1000E+01 OL rmin= 0.0000E+00 rmax= 0.8625E+04 ELVMAX rmin= -0.2797E+02 rmax= 0.5429E+04 ORO MAXC3: 718 483 322 138 23 3 ===> Replacing ELVMAX with ELVMAX-ORO <=== ===> if ELVMAX<=ORO replace with proxy <=== ===> the sum of mean orog (ORO) and std dev <=== after MAXC 3-6 km: 56 13 2 0 rmin= 0.0000E+00 rmax= 0.5908E+04 ELVMAX Testing at point (itest,jtest)= 56 76 SLM(itest,jtest)= 1.00000000000000 56 76 ORO(itest,jtest)= 2251.97428361499 56 76 SLM(itest,jtest)= 1.00000000000000 56 76 ORO(itest,jtest)= 2251.97428361499 56 76 LAND 458. 344. MODIFIED TO SEA 1. 202. AT 92 50 LAND 479. 424. MODIFIED TO SEA 1. 137. AT 92 65 after isolated points removed rmin= -0.2797E+02 rmax= 0.5429E+04 ORO ORO(itest,jtest)= 2251.97428361499 VAR(itest,jtest)= 1299.26430075515 VAR4(itest,jtest)= 3.03528075819193 OA(itest,jtest,1)= 5.659184318684796E-002 OA(itest,jtest,2)= -0.201647564469914 OA(itest,jtest,3)= -6.448362720403034E-002 OA(itest,jtest,4)= 0.113838600797791 OL(itest,jtest,1)= 1.00000000000000 OL(itest,jtest,2)= 1.00000000000000 OL(itest,jtest,3)= 1.00000000000000 OL(itest,jtest,4)= 1.00000000000000 Testing at point (itest,jtest)= 56 76 THETA(itest,jtest)= -28.6000812400744 GAMMA(itest,jtest)= 0.920826960608095 SIGMA(itest,jtest)= 0.214741888196975 ELVMAX(itest,jtest)= 5908.02571638501 EFAC= 0 rmin= 0.0000E+00 rmax= 0.5908E+04 ELVMAX NF1, NF0, FILTER= 0 0 F rmin= 0.0000E+00 rmax= 0.5908E+04 ELVMAX ELVMAX( 56 76 )= 5908.02571638501 after spectral filter is applied rmin= -0.2797E+02 rmax= 0.5429E+04 ORO rmin= -0.2797E+02 rmax= 0.5429E+04 ORF after nearest neighbor interpolation applied rmin= -0.2797E+02 rmax= 0.5429E+04 ORO rmin= -0.2797E+02 rmax= 0.5429E+04 ORF rmin= 0.0000E+00 rmax= 0.5908E+04 ELVMAX ORO,ORF(itest,jtest),itest,jtest: 2251.97428361499 2251.97428361499 56 76 ELVMAX( 56 76 )= 5908.02571638501 ORO,ELVMAX(i= 1 j= 96)= 0.19004E-01 0.12981E+02 0.0 ORO,ELVMAX(i= 2 j= 96)= 0.43538E+03 0.10366E+04 1.0 ORO,ELVMAX(i= 3 j= 96)= 0.37475E+03 0.47725E+03 1.0 ORO,ELVMAX(i= 4 j= 96)= 0.39747E+03 0.21353E+03 1.0 ORO,ELVMAX(i= 5 j= 96)= 0.40738E+03 0.27462E+03 1.0 ORO,ELVMAX(i= 6 j= 96)= 0.45141E+03 0.31559E+03 1.0 ORO,ELVMAX(i= 7 j= 96)= 0.59474E+03 0.64426E+03 1.0 ORO,ELVMAX(i= 8 j= 96)= 0.83743E+03 0.53757E+03 1.0 ORO,ELVMAX(i= 9 j= 96)= 0.10680E+04 0.16140E+04 1.0 ORO,ELVMAX(i= 10 j= 96)= 0.20486E+04 0.14474E+04 1.0 ORO,ELVMAX(i= 11 j= 96)= 0.22184E+04 0.13456E+04 1.0 ORO,ELVMAX(i= 12 j= 96)= 0.21794E+04 0.12886E+04 1.0 ORO,ELVMAX(i= 13 j= 96)= 0.11758E+04 0.16282E+04 1.0 ORO,ELVMAX(i= 14 j= 96)= 0.18112E+04 0.18538E+04 1.0 ORO,ELVMAX(i= 15 j= 96)= 0.58479E+03 0.19212E+04 1.0 ORO,ELVMAX(i= 16 j= 96)= 0.23364E+02 0.35864E+03 1.0 ORO,ELVMAX(i= 17 j= 96)= 0.16811E+03 0.85289E+03 1.0 ORO,ELVMAX(i= 18 j= 96)= -0.25785E+02 0.58979E+03 0.0 ORO,ELVMAX(i= 19 j= 96)= -0.26935E+02 0.55935E+02 0.0 ORO,ELVMAX(i= 20 j= 96)= -0.27000E+02 0.27000E+02 0.0 ORO,ELVMAX(i= 21 j= 96)= -0.26961E+02 0.79961E+02 0.0 Timer 5 time= 2.999999996973202E-003 Binary output time= 2.999999996973202E-003 netcdf dims are: 96 96 WRITE_NETCDF time= 6.900000000314321E-002 wrote netcdf file out.oro.tile?.nc ===== Deallocate Arrays and ENDING MTN VAR OROG program Total runtime time= 58.9080000000104 180.34user 4.19system 0:59.01elapsed 312%CPU (0avgtext+0avgdata 10644188maxresident)k 6692875inputs+1496outputs (16major+2663452minor)pagefaults 0swaps + [ 0 -ne 0 ] + [ 0 -eq 1 ] + outfile=oro.C96.tile2.nc + export outfile + mv ./out.oro.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile2.nc + echo 'file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile2.nc is created' + echo 'Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ' + exit 0 file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile2.nc is created Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x cfp: server task 0 for "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 2 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " exited with status 0 at 2017/08/25 20:30:09.862103. cfp: server task 0 executing "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 5 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " at 2017/08/25 20:30:09.862211. + nargv=7 + inorogexist=0 + export inorogexist + [ 7 -eq 6 ] + [ 7 -eq 7 ] + res=96 + export res + lonb=96 + export lonb + latb=96 + export latb + tile=5 + export tile + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + ntiles=6 + export ntiles + is_latlon=0 + export is_latlon + orogfile=none + export orogfile + hist_dir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export hist_dir + TMPDIR=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform + export TMPDIR + workdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile5 + export workdir + indir=/gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + export indir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ] + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile5 ] + mkdir -p /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile5 + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog ] + jcap=0 + export jcap + NF1=0 + export NF1 + NF2=0 + export NF2 + mtnres=1 + export mtnres + efac=0 + export efac + blat=0 + export blat + NR=0 + export NR + [ 0 -eq 1 ] + OUTGRID=C96_grid.tile5.nc + export OUTGRID + echo 'OUTGRID = C96_grid.tile5.nc' + echo 'workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile5' + echo 'outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog' + echo 'indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog' OUTGRID = C96_grid.tile5.nc workdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile5 outdir = /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog indir = /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/tile5 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/thirty.second.antarctic.new.bin fort.15 + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/landcover30.fixed . + cp /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog/gmted2010.30sec.int fort.235 ! MAKEMT ORO SLM VAR VAR4 DONE MAKEMT2 time= 52.1290000000008 rmin= -0.3136E-02 rmax= 0.4033E+04 ORO rmin= 0.0000E+00 rmax= 0.1000E+01 SLM rmin= 0.0000E+00 rmax= 0.9343E+03 VAR rmin= 0.0000E+00 rmax= 0.1000E+02 VAR4 MAKEPC2: DELTAY= 926.653477525523 ! MAKEMT ORO SLM VAR VAR4 DONE MAKEMT2 time= 53.3680000000022 rmin= -0.2711E+02 rmax= 0.3166E+04 ORO rmin= 0.0000E+00 rmax= 0.1000E+01 SLM rmin= 0.0000E+00 rmax= 0.9552E+03 VAR rmin= 0.0000E+00 rmax= 0.1000E+02 VAR4 MAKEPC2: DELTAY= 926.653477525523 + [ 0 -eq 1 ] + [ 0 -eq 0 ] + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile4.nc . + [ 0 -eq 1 ] + [ 0 -eq 0 ] + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile5.nc . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x . + echo 1 96 96 0 0 0 0 0 0 + 1> INPS + echo C96_grid.tile5.nc + 1>> INPS + echo none + 1>> INPS + cat INPS 1 96 96 0 0 0 0 0 0 C96_grid.tile5.nc none + echo 1 96 96 0 0 0 0 0 0 + 1> INPS + echo C96_grid.tile4.nc + 1>> INPS + time /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + echo none + 1>> INPS + 0< INPS + cat INPS INPUTOROG=none IM,JM= 96 96 1 96 96 0 0 0 0 0 0 Starting terr12 mtnlm7_slm30.f IMN,JMN: 43200 21600 outgrid=C96_grid.tile5.nc 1 96 96 0 0 0 0 0 0 C96_grid.tile4.nc none + time /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + 0< INPS nx = 192 In TERSUB, ITOPO= 1 Ocean Model LSM Present and Overrides OCEAN POINTS in LSM: mskocn= 1 Ocean LSM Reversed: NOTOCN= 1 Attempt to open/read UMD 30" slmsk MSKSRC= 1 INPUTOROG=none IM,JM= 96 96 1 96 96 0 0 0 0 0 0 Starting terr12 mtnlm7_slm30.f IMN,JMN: 43200 21600 outgrid=C96_grid.tile4.nc nx = 192 In TERSUB, ITOPO= 1 Ocean Model LSM Present and Overrides OCEAN POINTS in LSM: mskocn= 1 Ocean LSM Reversed: NOTOCN= 1 Attempt to open/read UMD 30" slmsk MSKSRC= 1 UMD lake mask opened OK -- ios,MSKSRC: 0 1 UMD lake, UMD(50,50)= 0 1 About to call read_g, ITOPO= 1 UMD lake mask opened OK -- ios,MSKSRC: 0 1 UMD lake, UMD(50,50)= 0 1 About to call read_g, ITOPO= 1 S.Pole i1,j1 : 1 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 2 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 3 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 4 21600 0.000000000000000E+000 0.000000000000000E+000 global0 max= 8625 min= -430 sum= 354026391267 i_count_notset= 0 global0 mean= 379 std.dev= 858 ko9s= 933120000 0 933120000 global0 max= 8625 min= -430 sum= 354026391267 i_count_notset= 0 global0 mean= 379 std.dev= 858 ko9s= 933120000 0 933120000 After read_g, glob(500,500)= 2657 IM, JM, NM, NR, NF0, NF1, EFAC, BLAT 96 96 0 0 0 0 0 0 imn,jmn,glob(imn,jmn)= 43200 21600 0 UBOUND ZAVG= 43200 21600 UBOUND glob= 43200 21600 UBOUND ZSLM= 43200 21600 UBOUND GICE= 43201 3601 UBOUND OCLSM= 96 96 After read_g, glob(500,500)= 2657 IM, JM, NM, NR, NF0, NF1, EFAC, BLAT 96 96 0 0 0 0 0 0 imn,jmn,glob(imn,jmn)= 43200 21600 0 UBOUND ZAVG= 43200 21600 UBOUND glob= 43200 21600 UBOUND ZSLM= 43200 21600 UBOUND GICE= 43201 3601 UBOUND OCLSM= 96 96 29 0 COMPUTE TERRAIN ON A FULL GAUSSIAN GRID SPECTR= F REVLAT= F ** with GICE-07 ** XLAT= -90.000 -88.105 -86.211 -84.316 -82.421 -80.526 -78.632 -76.737 -74.842 -72.947 -71.053 -69.158 -67.263 -65.368 -63.474 -61.579 -59.684 -57.789 -55.895 -54.000 -52.105 -50.211 -48.316 -46.421 -44.526 -42.632 -40.737 -38.842 -36.947 -35.053 -33.158 -31.263 -29.368 -27.474 -25.579 -23.684 -21.789 -19.895 -18.000 -16.105 -14.211 -12.316 -10.421 -8.526 -6.632 -4.737 -2.842 -0.947 0.947 2.842 4.737 6.632 8.526 10.421 12.316 14.211 16.105 18.000 19.895 21.789 23.684 25.579 27.474 29.368 31.263 33.158 35.053 36.947 38.842 40.737 42.632 44.526 46.421 48.316 50.211 52.105 54.000 55.895 57.789 59.684 61.579 63.474 65.368 67.263 69.158 71.053 72.947 74.842 76.737 78.632 80.526 82.421 84.316 86.211 88.105 90.000 Before GICE ZAVG(1,2)= 2801 1 Before GICE ZAVG(1,12)= 2804 1 Before GICE ZAVG(1,52)= 2789 1 Before GICE ZAVG(1,112)= 0 1 29 0 COMPUTE TERRAIN ON A FULL GAUSSIAN GRID SPECTR= F REVLAT= F ** with GICE-07 ** XLAT= -90.000 -88.105 -86.211 -84.316 -82.421 -80.526 -78.632 -76.737 -74.842 -72.947 -71.053 -69.158 -67.263 -65.368 -63.474 -61.579 -59.684 -57.789 -55.895 -54.000 -52.105 -50.211 -48.316 -46.421 -44.526 -42.632 -40.737 -38.842 -36.947 -35.053 -33.158 -31.263 -29.368 -27.474 -25.579 -23.684 -21.789 -19.895 -18.000 -16.105 -14.211 -12.316 -10.421 -8.526 -6.632 -4.737 -2.842 -0.947 0.947 2.842 4.737 6.632 8.526 10.421 12.316 14.211 16.105 18.000 19.895 21.789 23.684 25.579 27.474 29.368 31.263 33.158 35.053 36.947 38.842 40.737 42.632 44.526 46.421 48.316 50.211 52.105 54.000 55.895 57.789 59.684 61.579 63.474 65.368 67.263 69.158 71.053 72.947 74.842 76.737 78.632 80.526 82.421 84.316 86.211 88.105 90.000 Before GICE ZAVG(1,2)= 2801 1 Before GICE ZAVG(1,12)= 2804 1 Before GICE ZAVG(1,52)= 2789 1 Before GICE ZAVG(1,112)= 0 1 GICE 30" Antarctica RAMP orog 43200x3616 read OK Processing! Processing! Processing! GICE 30" Antarctica RAMP orog 43200x3616 read OK Processing! Processing! Processing! Ocean lsm file Opened OK: mskocn,istat= 1 0 Rd fail: Ocean lsm - continue, mskocn,ios= 0 -1 outgrid=C96_grid.tile5.nc Read the grid from file C96_grid.tile5.nc minlat= -45.0000000000000 maxlat= 45.0000000000000 north pole supergrid index is 0 0 south pole supergrid index is 0 0 Timer 1 time= 10.9809999999998 _____ SUBROUTINE MAKEMT2 Ocean lsm file Opened OK: mskocn,istat= 1 0 Rd fail: Ocean lsm - continue, mskocn,ios= 0 -1 outgrid=C96_grid.tile4.nc Read the grid from file C96_grid.tile4.nc minlat= -45.0000000000000 maxlat= 45.0000000000000 north pole supergrid index is 0 0 south pole supergrid index is 0 0 Timer 1 time= 11.0679999999993 _____ SUBROUTINE MAKEMT2 ! MAKEMT ORO SLM VAR VAR4 DONE MAKEMT2 time= 9.93499999999767 rmin= -0.2465E+01 rmax= 0.2410E+04 ORO rmin= 0.0000E+00 rmax= 0.1000E+01 SLM rmin= 0.0000E+00 rmax= 0.1102E+04 VAR rmin= 0.0000E+00 rmax= 0.1000E+02 VAR4 MAKEPC2: DELTAY= 926.653477525523 ! MAKEMT ORO SLM VAR VAR4 DONE MAKEMT2 time= 14.1279999999970 rmin= -0.1658E-02 rmax= 0.4695E+04 ORO rmin= 0.0000E+00 rmax= 0.1000E+01 SLM rmin= 0.0000E+00 rmax= 0.1618E+04 VAR rmin= 0.0000E+00 rmax= 0.1000E+02 VAR4 MAKEPC2: DELTAY= 926.653477525523 ! MAKE Principal Coord DONE MAKEPC2 time= 9.87200000000303 rmin= -0.8942E+02 rmax= 0.8972E+02 THETA rmin= 0.0000E+00 rmax= 0.9941E+00 GAMMA rmin= 0.0000E+00 rmax= 0.2646E+00 SIGMA rmin= -0.2465E+01 rmax= 0.2410E+04 ORO inputorog=none calling MAKEOA2 to compute OA, OL IM= 96 JM= 96 IMN= 43200 JMN= 21600 ! MAKE Principal Coord DONE MAKEPC2 time= 12.3999999999942 rmin= -0.8989E+02 rmax= 0.8983E+02 THETA rmin= 0.0000E+00 rmax= 0.9948E+00 GAMMA rmin= 0.0000E+00 rmax= 0.2540E+00 SIGMA rmin= -0.1658E-02 rmax= 0.4695E+04 ORO inputorog=none calling MAKEOA2 to compute OA, OL IM= 96 JM= 96 IMN= 43200 JMN= 21600 ! MAKEOA2 EXIT MAKEOA2 time= 11.0069999999978 rmin= -0.1000E+01 rmax= 0.1000E+01 OA rmin= 0.0000E+00 rmax= 0.9837E+00 OL rmin= 0.0000E+00 rmax= 0.4872E+04 ELVMAX rmin= -0.2465E+01 rmax= 0.2410E+04 ORO MAXC3: 31 10 0 0 0 0 ===> Replacing ELVMAX with ELVMAX-ORO <=== ===> if ELVMAX<=ORO replace with proxy <=== ===> the sum of mean orog (ORO) and std dev <=== after MAXC 3-6 km: 8 1 0 0 rmin= 0.0000E+00 rmax= 0.4096E+04 ELVMAX Testing at point (itest,jtest)= 26 84 SLM(itest,jtest)= 0.000000000000000E+000 26 84 ORO(itest,jtest)= 3.764411723850535E-002 26 84 SLM(itest,jtest)= 0.000000000000000E+000 26 84 ORO(itest,jtest)= 3.764411723850535E-002 26 84 LAND 395. 298. MODIFIED TO SEA 1. 99. AT 53 3 LAND 261. 217. MODIFIED TO SEA 1. 121. AT 47 4 LAND 30. 17. MODIFIED TO SEA 0. 6. AT 56 12 LAND 657. 507. MODIFIED TO SEA 1. 167. AT 54 30 LAND 162. 132. MODIFIED TO SEA 1. 22. AT 85 52 LAND 301. 242. MODIFIED TO SEA 1. 30. AT 66 56 LAND 1287. 939. MODIFIED TO SEA 0. 256. AT 25 84 after isolated points removed rmin= -0.2465E+01 rmax= 0.2410E+04 ORO ORO(itest,jtest)= 3.764411723850535E-002 VAR(itest,jtest)= 887.037906379468 VAR4(itest,jtest)= 0.000000000000000E+000 OA(itest,jtest,1)= 0.000000000000000E+000 OA(itest,jtest,2)= 0.000000000000000E+000 OA(itest,jtest,3)= 0.000000000000000E+000 OA(itest,jtest,4)= 0.000000000000000E+000 OL(itest,jtest,1)= 0.000000000000000E+000 OL(itest,jtest,2)= 0.000000000000000E+000 OL(itest,jtest,3)= 0.000000000000000E+000 OL(itest,jtest,4)= 0.000000000000000E+000 Testing at point (itest,jtest)= 26 84 THETA(itest,jtest)= 0.000000000000000E+000 GAMMA(itest,jtest)= 0.000000000000000E+000 SIGMA(itest,jtest)= 0.000000000000000E+000 ELVMAX(itest,jtest)= 4095.96235588276 EFAC= 0 rmin= 0.0000E+00 rmax= 0.4096E+04 ELVMAX NF1, NF0, FILTER= 0 0 F rmin= 0.0000E+00 rmax= 0.4096E+04 ELVMAX ELVMAX( 26 84 )= 4095.96235588276 after spectral filter is applied rmin= -0.2465E+01 rmax= 0.2410E+04 ORO rmin= -0.2465E+01 rmax= 0.2410E+04 ORF after nearest neighbor interpolation applied rmin= -0.2465E+01 rmax= 0.2410E+04 ORO rmin= -0.2465E+01 rmax= 0.2410E+04 ORF rmin= 0.0000E+00 rmax= 0.4096E+04 ELVMAX ORO,ORF(itest,jtest),itest,jtest: 3.764411723850535E-002 3.764411723850535E-002 26 84 ELVMAX( 26 84 )= 4095.96235588276 ORO,ELVMAX(i= 1 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 2 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 3 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 4 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 5 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 6 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 7 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 8 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 9 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 10 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 11 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 12 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 13 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 14 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 15 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 16 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 17 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 18 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 19 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 20 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 21 j= 96)= 0.00000E+00 0.00000E+00 0.0 Timer 5 time= 3.000000011525117E-003 Binary output time= 3.000000011525117E-003 netcdf dims are: 96 96 WRITE_NETCDF time= 0.176999999996042 wrote netcdf file out.oro.tile?.nc ===== Deallocate Arrays and ENDING MTN VAR OROG program Total runtime time= 42.5250000000087 180.75user 4.50system 0:42.69elapsed 433%CPU (0avgtext+0avgdata 10644172maxresident)k 6692875inputs+1496outputs (0major+2663459minor)pagefaults 0swaps + [ 0 -ne 0 ] + [ 0 -eq 1 ] + outfile=oro.C96.tile4.nc + export outfile + mv ./out.oro.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile4.nc + echo 'file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile4.nc is created' + echo 'Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ' file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile4.nc is created Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + exit 0 cfp: server task 3 for "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 4 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " exited with status 0 at 2017/08/25 20:31:05.129340. S.Pole i1,j1 : 1 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 2 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 3 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 4 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 1 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 2 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 3 21600 0.000000000000000E+000 0.000000000000000E+000 S.Pole i1,j1 : 4 21600 0.000000000000000E+000 0.000000000000000E+000 ! MAKE Principal Coord DONE MAKEPC2 time= 53.1919999999955 rmin= -0.8998E+02 rmax= 0.8985E+02 THETA rmin= 0.0000E+00 rmax= 0.9899E+00 GAMMA rmin= 0.0000E+00 rmax= 0.2424E+00 SIGMA rmin= -0.3136E-02 rmax= 0.4033E+04 ORO inputorog=none calling MAKEOA2 to compute OA, OL IM= 96 JM= 96 IMN= 43200 JMN= 21600 ! MAKE Principal Coord DONE MAKEPC2 time= 53.1699999999983 rmin= -0.8983E+02 rmax= 0.8980E+02 THETA rmin= 0.0000E+00 rmax= 0.9972E+00 GAMMA rmin= 0.0000E+00 rmax= 0.3093E+00 SIGMA rmin= -0.2711E+02 rmax= 0.3166E+04 ORO inputorog=none calling MAKEOA2 to compute OA, OL IM= 96 JM= 96 IMN= 43200 JMN= 21600 ! MAKEOA2 EXIT MAKEOA2 time= 13.3899999999994 rmin= -0.1000E+01 rmax= 0.1000E+01 OA rmin= 0.0000E+00 rmax= 0.1000E+01 OL rmin= 0.0000E+00 rmax= 0.6678E+04 ELVMAX rmin= -0.1658E-02 rmax= 0.4695E+04 ORO MAXC3: 403 200 106 25 0 0 ===> Replacing ELVMAX with ELVMAX-ORO <=== ===> if ELVMAX<=ORO replace with proxy <=== ===> the sum of mean orog (ORO) and std dev <=== after MAXC 3-6 km: 50 6 0 0 rmin= 0.0000E+00 rmax= 0.4635E+04 ELVMAX Testing at point (itest,jtest)= 59 70 SLM(itest,jtest)= 0.000000000000000E+000 59 70 ORO(itest,jtest)= 0.201005025125628 59 70 SLM(itest,jtest)= 0.000000000000000E+000 59 70 ORO(itest,jtest)= 0.201005025125628 59 70 LAND 377. 250. MODIFIED TO SEA 0. 60. AT 29 71 SEA 0. 4. MODIFIED TO LAND 601. 641. AT 38 77 LAND 262. 219. MODIFIED TO SEA 0. 31. AT 27 83 after isolated points removed rmin= -0.1658E-02 rmax= 0.4695E+04 ORO ORO(itest,jtest)= 0.201005025125628 VAR(itest,jtest)= 826.573245342859 VAR4(itest,jtest)= 0.000000000000000E+000 OA(itest,jtest,1)= 0.000000000000000E+000 OA(itest,jtest,2)= 0.000000000000000E+000 OA(itest,jtest,3)= 0.000000000000000E+000 OA(itest,jtest,4)= 0.000000000000000E+000 OL(itest,jtest,1)= 0.000000000000000E+000 OL(itest,jtest,2)= 0.000000000000000E+000 OL(itest,jtest,3)= 0.000000000000000E+000 OL(itest,jtest,4)= 0.000000000000000E+000 Testing at point (itest,jtest)= 59 70 THETA(itest,jtest)= 0.000000000000000E+000 GAMMA(itest,jtest)= 0.000000000000000E+000 SIGMA(itest,jtest)= 0.000000000000000E+000 ELVMAX(itest,jtest)= 4634.79899497487 EFAC= 0 rmin= 0.0000E+00 rmax= 0.4635E+04 ELVMAX NF1, NF0, FILTER= 0 0 F rmin= 0.0000E+00 rmax= 0.4635E+04 ELVMAX ELVMAX( 59 70 )= 4634.79899497487 after spectral filter is applied rmin= -0.1658E-02 rmax= 0.4695E+04 ORO rmin= -0.1658E-02 rmax= 0.4695E+04 ORF after nearest neighbor interpolation applied rmin= -0.1658E-02 rmax= 0.4695E+04 ORO rmin= -0.1658E-02 rmax= 0.4695E+04 ORF rmin= 0.0000E+00 rmax= 0.4635E+04 ELVMAX ORO,ORF(itest,jtest),itest,jtest: 0.201005025125628 0.201005025125628 59 70 ELVMAX( 59 70 )= 4634.79899497487 ORO,ELVMAX(i= 1 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 2 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 3 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 4 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 5 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 6 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 7 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 8 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 9 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 10 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 11 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 12 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 13 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 14 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 15 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 16 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 17 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 18 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 19 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 20 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 21 j= 96)= 0.00000E+00 0.00000E+00 0.0 Timer 5 time= 4.000000000814907E-003 Binary output time= 4.000000000814907E-003 netcdf dims are: 96 96 WRITE_NETCDF time= 6.500000000232831E-002 wrote netcdf file out.oro.tile?.nc ===== Deallocate Arrays and ENDING MTN VAR OROG program Total runtime time= 51.4099999999889 183.04user 4.36system 0:51.53elapsed 363%CPU (0avgtext+0avgdata 10644004maxresident)k 6692875inputs+1496outputs (0major+2663444minor)pagefaults 0swaps + [ 0 -ne 0 ] + [ 0 -eq 1 ] + outfile=oro.C96.tile5.nc + export outfile + mv ./out.oro.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile5.nc + echo 'file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile5.nc is created' + echo 'Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ' + exit 0 file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile5.nc is created Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x cfp: server task 0 for "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 5 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " exited with status 0 at 2017/08/25 20:31:13.857018. set oa1 = 0 and ol=1 at i,j= 48 49 set oa1 = 0 and ol=1 at i,j= 49 49 at i,j= 47 49 adjust dlat from 1.03853180149213 to 0.821224920254011 set oa1 = 0 and ol=0 at i,j= 48 49 set oa1 = 0 and ol=0 at i,j= 49 49 at i,j= 50 49 adjust dlat from 1.03853180148511 to 0.821224920253897 at i,j= 48 50 adjust dlat from 1.03853180148686 to 0.821224920253897 at i,j= 49 50 adjust dlat from 1.03853180149107 to 0.821224920253897 set oa1 = 0 and ol=1 at i,j= 48 48 set oa1 = 0 and ol=1 at i,j= 49 48 ! MAKEOA2 EXIT MAKEOA2 time= 56.0700000000070 rmin= -0.1000E+01 rmax= 0.1000E+01 OA rmin= 0.0000E+00 rmax= 0.1000E+01 OL rmin= 0.0000E+00 rmax= 0.4857E+04 ELVMAX rmin= -0.3136E-02 rmax= 0.4033E+04 ORO MAXC3: 364 14 0 0 0 0 ===> Replacing ELVMAX with ELVMAX-ORO <=== ===> if ELVMAX<=ORO replace with proxy <=== ===> the sum of mean orog (ORO) and std dev <=== after MAXC 3-6 km: 4 0 0 0 rmin= 0.0000E+00 rmax= 0.3626E+04 ELVMAX Testing at point (itest,jtest)= 49 36 SLM(itest,jtest)= 0.000000000000000E+000 49 36 ORO(itest,jtest)= 0.144831949690358 49 36 SLM(itest,jtest)= 0.000000000000000E+000 49 36 ORO(itest,jtest)= 0.144831949690358 49 36 after isolated points removed rmin= -0.3136E-02 rmax= 0.4033E+04 ORO ORO(itest,jtest)= 0.144831949690358 VAR(itest,jtest)= 501.199613344814 VAR4(itest,jtest)= 0.000000000000000E+000 OA(itest,jtest,1)= 0.000000000000000E+000 OA(itest,jtest,2)= 0.000000000000000E+000 OA(itest,jtest,3)= 0.000000000000000E+000 OA(itest,jtest,4)= 0.000000000000000E+000 OL(itest,jtest,1)= 0.000000000000000E+000 OL(itest,jtest,2)= 0.000000000000000E+000 OL(itest,jtest,3)= 0.000000000000000E+000 OL(itest,jtest,4)= 0.000000000000000E+000 Testing at point (itest,jtest)= 49 36 THETA(itest,jtest)= 0.000000000000000E+000 GAMMA(itest,jtest)= 0.000000000000000E+000 SIGMA(itest,jtest)= 0.000000000000000E+000 ELVMAX(itest,jtest)= 3625.85516805031 EFAC= 0 rmin= 0.0000E+00 rmax= 0.3626E+04 ELVMAX NF1, NF0, FILTER= 0 0 F rmin= 0.0000E+00 rmax= 0.3626E+04 ELVMAX ELVMAX( 49 36 )= 3625.85516805031 after spectral filter is applied rmin= -0.3136E-02 rmax= 0.4033E+04 ORO rmin= -0.3136E-02 rmax= 0.4033E+04 ORF after nearest neighbor interpolation applied rmin= -0.3136E-02 rmax= 0.4033E+04 ORO rmin= -0.3136E-02 rmax= 0.4033E+04 ORF rmin= 0.0000E+00 rmax= 0.3626E+04 ELVMAX ORO,ORF(itest,jtest),itest,jtest: 0.144831949690358 0.144831949690358 49 36 ELVMAX( 49 36 )= 3625.85516805031 ORO,ELVMAX(i= 1 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 2 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 3 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 4 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 5 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 6 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 7 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 8 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 9 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 10 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 11 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 12 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 13 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 14 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 15 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 16 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 17 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 18 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 19 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 20 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 21 j= 96)= 0.00000E+00 0.00000E+00 0.0 Timer 5 time= 2.999999996973202E-003 Binary output time= 2.999999996973202E-003 netcdf dims are: 96 96 WRITE_NETCDF time= 5.000000000291038E-002 wrote netcdf file out.oro.tile?.nc ===== Deallocate Arrays and ENDING MTN VAR OROG program Total runtime time= 175.729000000007 576.27user 4.42system 2:55.83elapsed 330%CPU (0avgtext+0avgdata 10668524maxresident)k 6692875inputs+1496outputs (0major+2669607minor)pagefaults 0swaps + [ 0 -ne 0 ] + [ 0 -eq 1 ] + outfile=oro.C96.tile6.nc + export outfile + mv ./out.oro.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile6.nc + echo 'file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile6.nc is created' + echo 'Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ' file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile6.nc is created Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x + exit 0 cfp: server task 2 for "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 6 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " exited with status 0 at 2017/08/25 20:32:07.856079. at i,j= 48 47 adjust dlat from 1.03853180148581 to 0.821224920253897 at i,j= 49 47 adjust dlat from 1.03853180149072 to 0.821224920253897 at i,j= 47 48 adjust dlat from 1.03853180149072 to 0.821224920253897 set oa1 = 0 and ol=0 at i,j= 48 48 set oa1 = 0 and ol=0 at i,j= 49 48 at i,j= 50 48 adjust dlat from 1.03853180148440 to 0.821224920253897 ! MAKEOA2 EXIT MAKEOA2 time= 56.1560000000027 rmin= -0.1000E+01 rmax= 0.1000E+01 OA rmin= 0.0000E+00 rmax= 0.1000E+01 OL rmin= 0.0000E+00 rmax= 0.6035E+04 ELVMAX rmin= -0.2711E+02 rmax= 0.3166E+04 ORO MAXC3: 205 27 5 1 0 0 ===> Replacing ELVMAX with ELVMAX-ORO <=== ===> if ELVMAX<=ORO replace with proxy <=== ===> the sum of mean orog (ORO) and std dev <=== after MAXC 3-6 km: 13 3 1 0 rmin= 0.0000E+00 rmax= 0.5298E+04 ELVMAX Testing at point (itest,jtest)= 69 72 SLM(itest,jtest)= 0.000000000000000E+000 69 72 ORO(itest,jtest)= 3.80084607875041 69 72 SLM(itest,jtest)= 0.000000000000000E+000 69 72 ORO(itest,jtest)= 3.80084607875041 69 72 SEA 338. 14. MODIFIED TO LAND 425. 41. AT 43 2 SEA 452. 282. MODIFIED TO LAND 834. 229. AT 67 14 LAND 191. 131. MODIFIED TO SEA 0. 59. AT 90 25 SEA 25. 59. MODIFIED TO LAND 129. 55. AT 28 28 LAND 233. 194. MODIFIED TO SEA 1. 96. AT 51 39 SEA 5. 105. MODIFIED TO LAND 684. 436. AT 67 89 SEA 325. 16. MODIFIED TO LAND 355. 23. AT 44 91 after isolated points removed rmin= -0.2711E+02 rmax= 0.3166E+04 ORO ORO(itest,jtest)= 3.80084607875041 VAR(itest,jtest)= 585.798551913004 VAR4(itest,jtest)= 0.000000000000000E+000 OA(itest,jtest,1)= 0.000000000000000E+000 OA(itest,jtest,2)= 0.000000000000000E+000 OA(itest,jtest,3)= 0.000000000000000E+000 OA(itest,jtest,4)= 0.000000000000000E+000 OL(itest,jtest,1)= 0.000000000000000E+000 OL(itest,jtest,2)= 0.000000000000000E+000 OL(itest,jtest,3)= 0.000000000000000E+000 OL(itest,jtest,4)= 0.000000000000000E+000 Testing at point (itest,jtest)= 69 72 THETA(itest,jtest)= 0.000000000000000E+000 GAMMA(itest,jtest)= 0.000000000000000E+000 SIGMA(itest,jtest)= 0.000000000000000E+000 ELVMAX(itest,jtest)= 5298.19915392125 EFAC= 0 rmin= 0.0000E+00 rmax= 0.5298E+04 ELVMAX NF1, NF0, FILTER= 0 0 F rmin= 0.0000E+00 rmax= 0.5298E+04 ELVMAX ELVMAX( 69 72 )= 5298.19915392125 after spectral filter is applied rmin= -0.2711E+02 rmax= 0.3166E+04 ORO rmin= -0.2711E+02 rmax= 0.3166E+04 ORF after nearest neighbor interpolation applied rmin= -0.2711E+02 rmax= 0.3166E+04 ORO rmin= -0.2711E+02 rmax= 0.3166E+04 ORF rmin= 0.0000E+00 rmax= 0.5298E+04 ELVMAX ORO,ORF(itest,jtest),itest,jtest: 3.80084607875041 3.80084607875041 69 72 ELVMAX( 69 72 )= 5298.19915392125 ORO,ELVMAX(i= 1 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 2 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 3 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 4 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 5 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 6 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 7 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 8 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 9 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 10 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 11 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 12 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 13 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 14 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 15 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 16 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 17 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 18 j= 96)= 0.00000E+00 0.00000E+00 0.0 ORO,ELVMAX(i= 19 j= 96)= 0.11001E+00 0.72890E+02 0.0 ORO,ELVMAX(i= 20 j= 96)= 0.52612E+02 0.15239E+03 1.0 ORO,ELVMAX(i= 21 j= 96)= 0.14498E+03 0.22202E+03 1.0 Timer 5 time= 2.999999996973202E-003 Binary output time= 2.999999996973202E-003 netcdf dims are: 96 96 WRITE_NETCDF time= 5.600000001140870E-002 wrote netcdf file out.oro.tile?.nc ===== Deallocate Arrays and ENDING MTN VAR OROG program Total runtime time= 178.110000000001 579.49user 4.12system 2:58.20elapsed 327%CPU (0avgtext+0avgdata 10669280maxresident)k 6692875inputs+1500outputs (16major+2669768minor)pagefaults 0swaps + [ 0 -ne 0 ] + [ 0 -eq 1 ] + outfile=oro.C96.tile3.nc + export outfile + mv ./out.oro.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile3.nc + echo 'file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile3.nc is created' + echo 'Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x ' + exit 0 file /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile3.nc is created Successfully running /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/ml01rg2.x cfp: server task 1 for "/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_make_orog.sh 96 3 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush /gpfs/hps/emc/global/noscrub/emc.glopara/svn/fv3gfs/fix/fix_orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform " exited with status 0 at 2017/08/25 20:32:09.057475. Application 64314729 resources: utime ~2140s, stime ~33s, Rss ~10669280, inblocks ~80447694, outblocks ~40311862 + rm /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/orog.file1 rm: cannot remove `/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/orog.file1': No such file or directory ++ date + echo 'End uniform orography generation at Fri Aug 25 20:32:09 UTC 2017' End uniform orography generation at Fri Aug 25 20:32:09 UTC 2017 + echo + echo '............ execute fv3gfs_filter_topo.sh ..............' ............ execute fv3gfs_filter_topo.sh .............. + /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush/fv3gfs_filter_topo.sh 96 /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo 0.12 1.1 0.12 8 /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + [ 9 -ne 9 ] + res=96 + export res + griddir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid + export griddir + orodir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog + export orodir + outdir=/gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo + export outdir + script_dir=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../ush + export script_dir + executable=/gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/filter_topo + export executable + [ ! -s /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/filter_topo ] + mosaic_grid=C96_mosaic.nc + export mosaic_grid + topo_file=oro.C96 + export topo_file + [ ! -s /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo ] + cd /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_mosaic.nc . + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile1.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile2.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile3.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile4.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile5.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile6.nc . + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile1.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile2.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile3.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile4.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile5.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/orog/oro.C96.tile6.nc . + cp /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/filter_topo . + cat + 1> input.nml 0<< \EOF EOF &filter_topo_nml grid_file = C96_mosaic.nc topo_file = oro.C96 mask_field = "land_frac" ! Defaults: cd4 = 0.12 ! 0.15 peak_fac = 1.1 ! 1.0 max_slope = 0.12 ! 0.12 n_del2_weak = 8 ! 16 / + aprun -n 1 -d 1 /gpfs/hps/emc/global/noscrub/George.Gayno/fv3gfs/trunk/global_shared.v15.0.0/ush/../exec/filter_topo &FILTER_TOPO_NML TOPO_FILE = oro.C96 , TOPO_FIELD = orog_filt , MASK_FIELD = land_frac , GRID_FILE = C96_mosaic.nc , ZERO_OCEAN = T, ZS_FILTER = T, CD4 = 0.120000000000000 , N_DEL2_WEAK = 8, PEAK_FAC = 1.10000000000000 , MAX_SLOPE = 0.120000000000000 , STRETCH_FAC = 1.00000000000000 , NESTED = F, GRID_TYPE = 0 / Read the grid from file C96_mosaic.nc Before filter: Max_slope= 3.320451562137262E-002 After filter: Max_slope= 3.320451562137262E-002 Application 64315179 resources: utime ~2s, stime ~0s, Rss ~20452, inblocks ~58559, outblocks ~21377 + [ 0 -ne 0 ] + echo 'successfully running filter topography for C96' successfully running filter topography for C96 + exit 0 + echo 'Grid and orography files are now prepared for uniform grid' Grid and orography files are now prepared for uniform grid + echo + echo -------------------------------------------------- -------------------------------------------------- + tile=1 + '[' 1 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo/oro.C96.tile1.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_oro_data.tile1.nc + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile1.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_grid.tile1.nc ++ expr 1 + 1 + tile=2 + '[' 2 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo/oro.C96.tile2.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_oro_data.tile2.nc + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile2.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_grid.tile2.nc ++ expr 2 + 1 + tile=3 + '[' 3 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo/oro.C96.tile3.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_oro_data.tile3.nc + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile3.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_grid.tile3.nc ++ expr 3 + 1 + tile=4 + '[' 4 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo/oro.C96.tile4.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_oro_data.tile4.nc + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile4.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_grid.tile4.nc ++ expr 4 + 1 + tile=5 + '[' 5 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo/oro.C96.tile5.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_oro_data.tile5.nc + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile5.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_grid.tile5.nc ++ expr 5 + 1 + tile=6 + '[' 6 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/filter_topo/oro.C96.tile6.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_oro_data.tile6.nc + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_grid.tile6.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_grid.tile6.nc ++ expr 6 + 1 + tile=7 + '[' 7 -le 6 ']' + cp /gpfs/hps/ptmp/George.Gayno/fv3_grid.uniform/C96/grid/C96_mosaic.nc /gpfs/hps/ptmp/George.Gayno/fv3_grid/fix/C96/C96_mosaic.nc + exit ------------------------------------------------------------ Sender: LSF System Subject: Job 150503: in cluster Done Job was submitted from host by user in cluster . Job was executed on host(s) <1*nid01276>, in queue , as user in cluster . <24*nid00407> was used as the home directory. was used as the working directory. Started at Fri Aug 25 20:28:19 2017 Results reported on Fri Aug 25 20:32:23 2017 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input #!/bin/sh #----WCOSS_CRAY JOBCARD #BSUB -L /bin/sh #BSUB -P GFS-T2O #BSUB -oo log.grid.%J #BSUB -eo log.grid.%J #BSUB -J grid_fv3 #BSUB -q dev #BSUB -M 2400 #BSUB -W 02:00 #BSUB -extsched 'CRAYLINUX[]' #----THEIA JOBCARD #PBS -N fv3_grid_driver #PBS -A fv3-cpu #PBS -o log.grid #PBS -e log.grid #PBS -l nodes=1:ppn=24 #PBS -q debug #PBS -l walltime=00:30:00 set -ax #machine=THEIA export machine=${machine:-WCOSS_C} ulimit -a ulimit -s unlimited #----------------------------- # Makes FV3 cubed-sphere grid #----------------------------- #---------------------------------------------------------------- export USER=$LOGNAME export res=96 # resolution of tile: 48, 96, 192, 384, 768, 1152, 3072 export gtype=uniform # grid type: uniform, stretch, or nest #---------------------------------------------------------------- # The orography code runs with threads. On Cray, the code is # optimized for six threads. Do not change. #---------------------------------------------------------------- export OMP_NUM_THREADS=6 export OMP_STACKSIZE=2048m if [ $machine = WCOSS_C ]; then set +x . $MODULESHOME/init/sh module load PrgEnv-intel cfp-intel-sandybridge/1.1.0 (... more ...) ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 2.89 sec. Max Memory : 31 MB Average Memory : 21.50 MB Total Requested Memory : 2400.00 MB Delta Memory : 2369.00 MB Max Swap : - Max Processes : 4 Max Threads : 5 Run time : 239 sec. Turnaround time : 245 sec. The output (if any) is above this job summary. ------------------------------------------------------------------------ ALPS Resource Utilization Report (RUR) Summary for LSF Job: 150503 STATUS: exit codes: 0 cores: 0 CPU: stime: 761.464 s utime: 93978.3 s MEMORY: max_rss: 9868 MiB active(anon): 1887508 MiB active(file): 151152 MiB inactive(anon): 97548 MiB inactive(file): 637160 MiB majfaults: 351 minfaults: 265488938 pageswpcnt: 0 I/O: rcalls: 211407 wcalls: 304402 rchar: 266.45 Gib wchar: 36.70 Gib bkiowait: 3.19371 s